BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035A01SP1|AL429976
(907 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig682 1779 0.0
>3x_Contig682
Length = 2655
Score = 1779 bits (895), Expect = 0.0
Identities = 902/907 (99%)
Strand = Plus / Minus
Query: 1 gatccttaaaattaacaaacgacatcttgagtagctctagagttcaacaatagggcaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2126 gatccttaaaattaacaaacgacatcttgagtagctctagagttcaacaatagggcaaca 2067
Query: 61 atcaaaccgtacaaacccaaaacttcagcgaaaatcaagatcaaaatcataccaacgaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2066 atcaaaccgtacaaacccaaaacttcagcgaaaatcaagatcaaaatcataccaacgaat 2007
Query: 121 aatcttggttgttgagcagtacctctaacacctgcatcaccaacaataccaatggcgaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2006 aatcttggttgttgagcagtacctctaacacctgcatcaccaacaataccaatggcgaaa 1947
Query: 181 ccagcagctagaccacttaacccaacagacaaaccagcacctaattggatgaacccagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1946 ccagcagctagaccacttaacccaacagacaaaccagcacctaattggatgaacccagtg 1887
Query: 241 tataaagcttgcttttggcccaaagagtaacacaccaaaacagaaacaactaaaccgtaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1886 tataaagcttgcttttggcccaaagagtaacacaccaaaacagaaacaactaaaccgtaa 1827
Query: 301 atggcaatgataccagccataataaccggaacaatattcttgaacaatagatctggtctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1826 atggcaatgataccagccataataaccggaacaatattcttgaacaatagatctggtctc 1767
Query: 361 aagacacatgtcgcacaaataccgacacctgacttggcagtaccgtaagcagcaccgaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1766 aagacacatgtcgcacaaataccgacacctgacttggcagtaccgtaagcagcaccgaaa 1707
Query: 421 gaggtgaaaatwatggctgcagcacaaccgatggcaccaaagaatggagcatacactgga 480
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1706 gaggtgaaaataatggctgcagcacaaccgatggcaccaaagaatggagcatacactgga 1647
Query: 481 cacaaatcactcataatgaagtctcttttttgaacaaatttgaaattggataaagcacta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1646 cacaaatcactcataatgaagtctcttttttgaacaaatttgaaattggataaagcacta 1587
Query: 541 aaatatctgttatgtacgatctatagtgcgttgaggtctgadaactttcttaaaggataa 600
|||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1586 aaatatctgtaatgtacgatctatagtgcgttgaggtctgaaaactttcttaaaggataa 1527
Query: 601 ttaadaaaccagtttcagaagtaactttaaaacgtttggactcttaaaatgcgatgataa 660
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1526 ttaaaaaaccagtttcagaagtaactttaaaacgtttggactcttaaaatgcgatgataa 1467
Query: 661 tattcaattgaaagagtaatttggaatatcggtccaaaataaaaaggaaagattttcaac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1466 tattcaattgaaagagtaatttggaatatcggtccaaaataaaaaggaaagattttcaac 1407
Query: 721 gggcgataagtgattgagcaataatcttcaaaacccagtctaaagctatagcgatctaac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1406 gggcgataagtgattgagcaataatcttcaaaacccagtctaaagctatagcgatctaac 1347
Query: 781 ttttgtgaactcactctttaataaagtataatgaaacaccaattaatttattgccgtaca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1346 ttttgtgaactcactctttaataaagtataatgaaacaccaattaatttattgccgtaca 1287
Query: 841 agctgtctggcaatgtggtagttaatcatttcctctgtcttataatctttgttaatccma 900
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1286 agctgtctggcaatgtggtagttaatcatttcctctgtcttataatctttgttaatccaa 1227
Query: 901 aattctt 907
|||||||
Sbjct: 1226 aattctt 1220
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7184
Number of Sequences: 1807
Number of extensions: 7184
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 907
length of database: 10,358,551
effective HSP length: 16
effective length of query: 891
effective length of database: 10,329,639
effective search space: 9203708349
effective search space used: 9203708349
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)